STRINGSTRING
MLOC_14393.3 protein (Hordeum vulgare) - STRING interaction network
"MLOC_14393.3" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_14393.3Predicted protein (599 aa)    
Predicted Functional Partners:
MLOC_51066.1
Predicted protein (403 aa)
           
  0.497
MLOC_50932.2
Predicted protein (70 aa)
           
  0.497
MLOC_36661.1
Predicted protein (106 aa)
           
  0.497
MLOC_58213.2
Pectinesterase (391 aa)
           
  0.497
MLOC_60300.2
Predicted protein (97 aa)
           
  0.424
MLOC_36972.2
Pectinesterase ; Acts in the modification of cell walls via demethylesterification of cell wall pectin (548 aa)
           
  0.412
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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