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STRINGSTRING
MLOC_15787.2 protein (Hordeum vulgare) - STRING interaction network
"MLOC_15787.2" - RNA-dependent RNA polymerase in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_15787.2RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (295 aa)    
Predicted Functional Partners:
MLOC_67808.1
RNA helicase (643 aa)
           
  0.687
MLOC_58322.2
Uncharacterized protein (347 aa)
           
  0.678
MLOC_12299.1
Uncharacterized protein (989 aa)
     
 
  0.661
eIF4E
eIF4E; Belongs to the eukaryotic initiation factor 4E family (161 aa)
     
 
  0.605
MLOC_58105.1
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (976 aa)
           
  0.581
MLOC_64326.1
Uncharacterized protein; Belongs to the DEAD box helicase family (609 aa)
           
  0.552
MLOC_53494.2
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily (532 aa)
     
 
  0.539
MLOC_75013.2
Uncharacterized protein (1009 aa)
     
   
  0.505
MLOC_43713.1
Uncharacterized protein; Belongs to the argonaute family (934 aa)
     
   
  0.503
MLOC_52515.2
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (444 aa)
           
  0.502
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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