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STRINGSTRING
MLOC_16420.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_16420.1" - Aspartate aminotransferase in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_16420.1Aspartate aminotransferase (410 aa)    
Predicted Functional Partners:
MLOC_55337.1
4-hydroxyphenylpyruvate dioxygenase ; Belongs to the 4HPPD family (434 aa)
       
  0.996
MLOC_44080.1
Uncharacterized protein; Asparagine synthetase (592 aa)
     
 
  0.996
MLOC_69020.1
Uncharacterized protein; Glutamate dehydrogenase (450 aa)
     
  0.995
MLOC_69600.1
Isocitrate dehydrogenase [NADP] ; Belongs to the isocitrate and isopropylmalate dehydrogenases family (473 aa)
     
  0.994
MLOC_14736.3
Uncharacterized protein (465 aa)
     
  0.994
MLOC_51254.1
Isocitrate dehydrogenase [NADP] ; Belongs to the isocitrate and isopropylmalate dehydrogenases family (414 aa)
     
  0.991
MLOC_3886.1
Isocitrate dehydrogenase [NADP] ; Belongs to the isocitrate and isopropylmalate dehydrogenases family (446 aa)
     
  0.991
MLOC_11947.2
Uncharacterized protein (475 aa)
     
 
  0.990
PURA
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP (484 aa)
   
 
  0.989
MLOC_54648.1
Uncharacterized protein; Belongs to the ATCase/OTCase family (350 aa)
   
  0.988
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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