STRINGSTRING
MLOC_17018.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_17018.1" - Peptidyl-prolyl cis-trans isomerase in Hordeum vulgare
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_17018.1Peptidyl-prolyl cis-trans isomerase (157 aa)    
Predicted Functional Partners:
MLOC_11932.3
Peptidyl-prolyl cis-trans isomerase (276 aa)
   
     
  0.607
MLOC_1517.1
Predicted protein (107 aa)
     
      0.598
MLOC_44278.1
Peptidyl-prolyl cis-trans isomerase ; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (108 aa)
     
 
  0.595
MLOC_6969.2
Peptidyl-prolyl cis-trans isomerase (151 aa)
   
     
  0.590
MLOC_58977.1
Predicted protein (323 aa)
       
      0.589
MLOC_44102.4
Uncharacterized protein (2111 aa)
       
      0.589
MLOC_58976.1
Ribosome biogenesis protein BOP1 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (696 aa)
     
      0.583
MLOC_54115.1
Predicted protein (122 aa)
     
 
  0.570
MLOC_77976.1
Predicted protein (195 aa)
     
      0.561
MLOC_4680.1
Eukaryotic translation initiation factor 4E (161 aa)
     
      0.561
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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