STRINGSTRING
MLOC_18320.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_18320.1" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_18320.1Predicted protein (237 aa)    
Predicted Functional Partners:
MLOC_67112.1
Predicted protein (142 aa)
     
 
  0.889
rpoA
Uncharacterized protein (233 aa)
     
 
  0.826
MLOC_54988.1
Uncharacterized protein (322 aa)
     
 
  0.826
MLOC_54361.1
Uncharacterized protein (355 aa)
     
 
  0.826
MLOC_61052.6
Predicted protein (823 aa)
     
 
  0.754
MLOC_60339.1
Uncharacterized protein (194 aa)
     
 
  0.754
MLOC_38587.1
DNA-directed RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (901 aa)
     
 
  0.754
MLOC_25582.5
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (651 aa)
     
 
  0.754
MLOC_24779.1
Uncharacterized protein (189 aa)
     
 
  0.754
rpoB
Plastid-encoded RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (347 aa)
     
 
  0.754
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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