Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (826 aa)
Predicted Functional Partners:
Predicted protein (563 aa)
Predicted protein; Belongs to the protein kinase superfamily (234 aa)
Uncharacterized protein; Belongs to the protein kinase superfamily (402 aa)
Uncharacterized protein (206 aa)
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (245 aa)
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (143 aa)
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1018 aa)
Uncharacterized protein; Belongs to the SKP1 family (360 aa)
Uncharacterized protein (334 aa)
Uncharacterized protein (250 aa)
Your Current Organism:
NCBI taxonomy Id: 4513 Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley