STRINGSTRING
MLOC_19100.2 protein (Hordeum vulgare) - STRING interaction network
"MLOC_19100.2" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_19100.2Uncharacterized protein (333 aa)    
Predicted Functional Partners:
MLOC_13255.2
Uncharacterized protein (194 aa)
     
  0.997
MLOC_66388.3
Predicted protein (758 aa)
     
  0.997
MLOC_9783.1
Predicted protein (209 aa)
     
  0.993
MLOC_50938.1
Uncharacterized protein (931 aa)
       
      0.987
MLOC_70032.1
Predicted protein ; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (282 aa)
       
  0.979
MLOC_10618.1
Transcription initiation factor IIE subunit beta ; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (283 aa)
       
  0.979
MLOC_33350.3
Predicted protein (146 aa)
     
  0.951
MLOC_60005.1
Predicted protein (436 aa)
     
  0.945
MLOC_20545.1
Predicted protein (136 aa)
     
  0.942
MLOC_10169.2
Uncharacterized protein (512 aa)
     
  0.930
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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