STRINGSTRING
MLOC_1940.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_1940.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_1940.1Uncharacterized protein (135 aa)    
Predicted Functional Partners:
MLOC_13604.1
Uncharacterized protein (2118 aa)
       
  0.924
MLOC_6172.1
Uncharacterized protein (336 aa)
 
  0.876
MLOC_2842.1
Predicted protein (635 aa)
 
  0.872
MLOC_1615.3
Uncharacterized protein (638 aa)
 
  0.869
PhyC
Phytochrome ; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1147 aa)
   
  0.860
MLOC_68288.1
Uncharacterized protein (416 aa)
     
  0.843
MLOC_5515.4
Predicted protein (713 aa)
     
  0.843
MLOC_38074.2
Uncharacterized protein (303 aa)
     
  0.843
MLOC_81684.1
Phytochrome A (566 aa)
   
  0.810
MLOC_64196.1
Predicted protein (777 aa)
   
  0.810
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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