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MLOC_19559.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_19559.1" - Laccase in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_19559.1Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family (566 aa)    
Predicted Functional Partners:
MLOC_58800.2
Uncharacterized protein (358 aa)
     
   
  0.873
MLOC_6919.11
Peroxidase; Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily (334 aa)
     
   
  0.869
MLOC_57855.1
Uncharacterized protein (592 aa)
     
        0.864
MLOC_45727.1
Uncharacterized protein; Belongs to the plant LTP family (177 aa)
     
        0.784
MLOC_75066.1
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (155 aa)
     
 
  0.772
MLOC_37092.1
Uncharacterized protein (425 aa)
           
  0.552
MLOC_36440.2
Uncharacterized protein (348 aa)
           
  0.551
MLOC_5871.2
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (682 aa)
           
  0.547
MLOC_51932.2
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (836 aa)
           
  0.547
MLOC_56664.1
Uncharacterized protein (206 aa)
           
  0.546
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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