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STRINGSTRING
MLOC_19824.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_19824.1" - Alpha-amylase in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_19824.1Alpha-amylase (340 aa)    
Predicted Functional Partners:
MLOC_10776.1
Uncharacterized protein (776 aa)
   
 
  0.999
MLOC_71287.2
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (857 aa)
   
  0.999
MLOC_4869.1
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (286 aa)
   
  0.999
MLOC_69929.2
4-alpha-glucanotransferase (323 aa)
   
 
  0.997
MLOC_36711.3
Uncharacterized protein (711 aa)
   
 
  0.995
MLOC_37549.1
Uncharacterized protein (931 aa)
   
 
  0.995
MLOC_48036.1
Uncharacterized protein (421 aa)
   
 
  0.993
MLOC_58488.2
Beta-amylase (549 aa)
         
  0.992
MLOC_63722.1
Uncharacterized protein (483 aa)
   
 
  0.992
MLOC_56800.7
Uncharacterized protein (493 aa)
   
 
  0.989
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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