• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
MLOC_20110.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_20110.1" - 3-ketoacyl-CoA synthase in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_20110.13-ketoacyl-CoA synthase (545 aa)    
Predicted Functional Partners:
MLOC_76008.1
Uncharacterized protein (122 aa)
         
  0.980
MLOC_19478.1
Uncharacterized protein (300 aa)
           
  0.716
MLOC_73743.2
Uncharacterized protein; Belongs to the cytochrome P450 family (513 aa)
           
  0.715
MLOC_81598.1
Uncharacterized protein (236 aa)
     
 
  0.700
MLOC_74083.1
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (273 aa)
     
 
  0.700
MLOC_65044.4
Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (336 aa)
     
 
  0.700
MLOC_60985.1
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (340 aa)
     
 
  0.700
MLOC_15612.2
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (164 aa)
     
 
  0.700
MLOC_74700.1
Methylenetetrahydrofolate reductase (287 aa)
           
  0.696
MLOC_6919.11
Peroxidase; Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily (334 aa)
           
  0.687
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
Server load: low (15%) [HD]