STRINGSTRING
MLOC_20185.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_20185.1" - 3-methyl-2-oxobutanoate hydroxymethyltransferase in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_20185.13-methyl-2-oxobutanoate hydroxymethyltransferase ; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (349 aa)    
Predicted Functional Partners:
MLOC_16653.1
Predicted protein (507 aa)
         
  0.877
MLOC_72702.3
Branched-chain-amino-acid aminotransferase (397 aa)
       
  0.876
MLOC_67926.1
Branched-chain-amino-acid aminotransferase (410 aa)
       
  0.876
MLOC_10075.1
Uncharacterized protein (568 aa)
         
  0.686
MLOC_11663.2
Branched-chain-amino-acid aminotransferase (408 aa)
       
  0.676
MLOC_33401.1
Predicted protein (627 aa)
         
  0.611
MLOC_9842.9
Predicted protein (318 aa)
       
  0.548
MLOC_74573.2
Uncharacterized protein (258 aa)
       
  0.548
MLOC_73629.1
Predicted protein (331 aa)
       
  0.548
MLOC_72925.2
Uncharacterized protein (302 aa)
       
  0.548
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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