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STRINGSTRING
MLOC_20456.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_20456.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_20456.1Uncharacterized protein (341 aa)    
Predicted Functional Partners:
MLOC_21829.1
Uncharacterized protein (439 aa)
     
        0.841
MLOC_21832.1
Uncharacterized protein (393 aa)
           
  0.784
MLOC_81833.4
Uncharacterized protein (1400 aa)
           
  0.739
MLOC_77494.2
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (943 aa)
           
  0.730
MLOC_21581.1
Uncharacterized protein (102 aa)
           
  0.683
MLOC_65772.2
Uncharacterized protein (260 aa)
     
        0.648
MLOC_44491.1
Predicted protein; Belongs to the protein kinase superfamily (466 aa)
     
        0.640
MLOC_60126.1
Uncharacterized protein (181 aa)
           
  0.586
MLOC_37547.2
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1056 aa)
           
  0.586
MLOC_22756.1
Uncharacterized protein (148 aa)
           
  0.586
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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