STRINGSTRING
MLOC_21080.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_21080.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_21080.1Uncharacterized protein (188 aa)    
Predicted Functional Partners:
MLOC_21558.1
Predicted protein (635 aa)
     
 
  0.923
MLOC_54493.1
Predicted protein (311 aa)
     
 
  0.879
MLOC_38181.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (881 aa)
   
 
  0.757
MLOC_9905.2
Predicted protein (527 aa)
     
 
  0.728
MLOC_76454.6
Predicted protein (491 aa)
     
 
  0.728
MLOC_6130.3
Uncharacterized protein (284 aa)
     
 
  0.728
MLOC_61195.1
Uncharacterized protein (580 aa)
     
 
  0.615
MLOC_61115.1
Uncharacterized protein (181 aa)
     
 
  0.615
MLOC_73716.2
DNA topoisomerase ; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (418 aa)
   
   
  0.599
MLOC_9203.1
Predicted protein (464 aa)
   
 
0.594
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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