STRINGSTRING
MLOC_21485.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_21485.1" - Pectinesterase in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_21485.1Pectinesterase (289 aa)    
Predicted Functional Partners:
MLOC_18360.1
Pectate lyase (378 aa)
 
   
  0.842
MLOC_6904.2
Pectate lyase (405 aa)
 
   
  0.807
MLOC_60466.2
Uncharacterized protein (224 aa)
 
   
  0.774
MLOC_67885.6
Predicted protein (400 aa)
 
   
  0.772
MLOC_12660.1
Uncharacterized protein (230 aa)
 
   
  0.761
MLOC_22135.1
Uncharacterized protein (415 aa)
 
   
  0.751
MLOC_6444.1
Uncharacterized protein (409 aa)
 
   
  0.751
MLOC_54501.1
Predicted protein; Belongs to the glycosyl hydrolase 28 family (434 aa)
 
   
  0.748
MLOC_13972.1
Uncharacterized protein (311 aa)
 
   
  0.745
MLOC_60251.1
Pectate lyase (158 aa)
       
  0.743
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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