STRINGSTRING
MLOC_21941.2 protein (Hordeum vulgare) - STRING interaction network
"MLOC_21941.2" - Predicted protein in Hordeum vulgare
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_21941.2Predicted protein (287 aa)    
Predicted Functional Partners:
MLOC_61052.6
Predicted protein (823 aa)
   
  0.921
MLOC_25582.5
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (651 aa)
   
  0.921
MLOC_15664.1
Uncharacterized protein (670 aa)
   
  0.921
MLOC_54988.1
Uncharacterized protein (322 aa)
   
  0.920
MLOC_54361.1
Uncharacterized protein (355 aa)
   
  0.920
MLOC_60339.1
Uncharacterized protein (194 aa)
   
  0.920
rpoB
Plastid-encoded RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (347 aa)
   
  0.920
MLOC_66040.1
RNA polymerase I largest subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (868 aa)
   
 
  0.912
MLOC_4294.1
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (829 aa)
   
 
  0.912
MLOC_78896.3
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (552 aa)
   
 
  0.909
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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