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STRINGSTRING
MLOC_23836.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_23836.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_23836.1Uncharacterized protein (152 aa)    
Predicted Functional Partners:
MLOC_53540.1
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (277 aa)
     
  0.960
MLOC_13689.2
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (118 aa)
     
  0.960
MLOC_13390.2
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (1448 aa)
     
 
    0.903
MLOC_18320.1
Uncharacterized protein (237 aa)
       
 
  0.894
MLOC_4644.4
Uncharacterized protein (1030 aa)
     
 
    0.880
MLOC_6673.4
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (655 aa)
     
  0.872
MLOC_27773.1
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (526 aa)
     
  0.872
MLOC_13915.2
Uncharacterized protein (282 aa)
     
  0.872
MLOC_14463.1
Uncharacterized protein (861 aa)
     
  0.871
MLOC_78789.1
Uncharacterized protein (1088 aa)
     
  0.868
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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