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STRINGSTRING
MLOC_24191.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_24191.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_24191.1Uncharacterized protein (234 aa)    
Predicted Functional Partners:
TOP6A
DNA topoisomerase 6 subunit A; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity (441 aa)
       
 
  0.933
MLOC_64928.2
Uncharacterized protein (301 aa)
           
  0.802
MLOC_37459.1
Uncharacterized protein (2069 aa)
           
  0.789
MLOC_3949.1
Uncharacterized protein (74 aa)
           
  0.714
MLOC_14791.5
Uncharacterized protein (302 aa)
           
  0.714
MLOC_61355.1
Uncharacterized protein (462 aa)
           
  0.711
MLOC_22343.1
Uncharacterized protein (240 aa)
           
  0.711
MLOC_36865.1
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (199 aa)
           
  0.708
TOP6B
DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family (690 aa)
           
  0.705
MLOC_14192.4
Uncharacterized protein (392 aa)
       
 
  0.655
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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