STRINGSTRING
matK protein (Hordeum vulgare) - STRING interaction network
"matK" - Maturase K in Hordeum vulgare
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
matKMaturase K ; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns (314 aa)    
Predicted Functional Partners:
rpoC1
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (545 aa)
     
   
  0.603
ccsA
Uncharacterized protein (188 aa)
     
   
  0.602
MLOC_24891.1
Uncharacterized protein (141 aa)
     
   
  0.600
MLOC_34251.1
Uncharacterized protein (138 aa)
     
   
  0.590
ndhF
NADH-plastoquinone oxidoreductase subunit 5 (133 aa)
     
   
  0.574
MLOC_60339.1
Uncharacterized protein (194 aa)
     
   
  0.567
rpoB
Plastid-encoded RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (347 aa)
     
   
  0.567
rpoC2
Plastid-encoded RNA polymerase subunit beta’’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (205 aa)
     
   
  0.558
rbcL
Ribulose bisphosphate carboxylase large chain (168 aa)
     
   
  0.558
psbA
Uncharacterized protein (61 aa)
     
   
  0.512
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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