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MLOC_24891.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_24891.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_24891.1Uncharacterized protein (141 aa)    
Predicted Functional Partners:
MLOC_9538.1
Uncharacterized protein; DNA-directed RNA polymerase (86 aa)
   
 
  0.955
4525121
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (682 aa)
   
 
  0.950
rpoC1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (545 aa)
   
 
  0.949
AGP50756
Photosystem I assembly protein Ycf3; Essential for the assembly of the photosystem I (PSI) complex. May act as a chaperone-like factor to guide the assembly of the PSI subunits (172 aa)
     
  0.917
atpH
ATP synthase subunit c, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (81 aa)
   
   
  0.881
rpl16
50S ribosomal protein L16, chloroplastic; Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family (144 aa)
   
   
  0.877
atpF
ATP synthase subunit b, chloroplastic; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) (188 aa)
   
   
  0.876
rps2
30S ribosomal protein S2, chloroplastic; Ribosomal protein S2 (236 aa)
 
  0.866
rpl14
50S ribosomal protein L14, chloroplastic; Binds to 23S rRNA (123 aa)
   
   
  0.851
rpoA
Uncharacterized protein; DNA-directed RNA polymerase subunit alpha (233 aa)
   
  0.832
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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