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STRINGSTRING
MLOC_25299.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_25299.1" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_25299.1Predicted protein (457 aa)    
Predicted Functional Partners:
MLOC_68522.2
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (801 aa)
   
   
  0.955
MLOC_34818.2
Uncharacterized protein (421 aa)
   
   
  0.955
MLOC_44530.1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family (399 aa)
   
   
  0.901
MLOC_80818.1
Uncharacterized protein (565 aa)
     
   
  0.893
MLOC_34374.2
Uncharacterized protein (691 aa)
     
   
  0.893
MLOC_79909.1
Uncharacterized protein (237 aa)
   
 
  0.881
MLOC_11841.1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family (300 aa)
 
 
  0.847
MLOC_20770.1
Uncharacterized protein (335 aa)
     
 
  0.815
MLOC_68915.2
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family (398 aa)
   
 
  0.811
MLOC_20962.1
Tyrosine--tRNA ligase (512 aa)
   
   
  0.800
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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