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STRINGSTRING
MLOC_25886.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_25886.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_25886.1Uncharacterized protein (472 aa)    
Predicted Functional Partners:
MLOC_53029.2
Uncharacterized protein (250 aa)
     
  0.987
MLOC_58844.1
DNA-(apurinic or apyrimidinic site) lyase (154 aa)
   
  0.970
MLOC_62977.1
Uncharacterized protein (626 aa)
     
  0.969
MLOC_46576.1
Uncharacterized protein (118 aa)
       
  0.948
MLOC_17211.14
Uncharacterized protein (986 aa)
   
  0.942
MLOC_5547.4
DNA ligase (1117 aa)
   
  0.934
MLOC_49689.2
ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase (701 aa)
     
  0.908
MLOC_30712.1
Uncharacterized protein (278 aa)
     
 
  0.885
MLOC_5045.1
Predicted protein (592 aa)
     
  0.882
MLOC_21017.1
Uncharacterized protein (337 aa)
     
 
  0.879
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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