STRINGSTRING
MLOC_28080.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_28080.1" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_28080.1Predicted protein (80 aa)    
Predicted Functional Partners:
MLOC_19368.7
Predicted protein (904 aa)
       
  0.989
MLOC_81023.1
Transcription elongation factor SPT5 (1028 aa)
       
  0.985
MLOC_51216.2
Predicted protein (1049 aa)
       
  0.985
MLOC_67112.1
Predicted protein (142 aa)
     
  0.982
MLOC_53350.1
Predicted protein (196 aa)
     
  0.974
MLOC_51142.2
Uncharacterized protein (265 aa)
     
  0.974
MLOC_54988.1
Uncharacterized protein (322 aa)
     
  0.968
MLOC_51367.2
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (114 aa)
     
  0.962
MLOC_7554.5
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (482 aa)
       
  0.948
MLOC_73160.1
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1760 aa)
       
  0.948
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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