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STRINGSTRING
MLOC_28454.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_28454.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_28454.1Uncharacterized protein (271 aa)    
Predicted Functional Partners:
MLOC_4782.1
Uncharacterized protein (242 aa)
     
  0.891
MLOC_71607.1
Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (149 aa)
     
 
  0.884
MLOC_15275.1
Uncharacterized protein (166 aa)
     
      0.858
MLOC_72063.1
Uncharacterized protein (1012 aa)
     
  0.857
MLOC_70449.2
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (595 aa)
     
    0.811
MLOC_6378.3
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (188 aa)
     
 
  0.763
MLOC_67065.1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly (329 aa)
     
    0.749
MLOC_45254.1
Uncharacterized protein (194 aa)
     
    0.741
MLOC_71860.1
Uncharacterized protein (302 aa)
       
  0.722
MLOC_67376.2
Uncharacterized protein (314 aa)
     
  0.712
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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