STRINGSTRING
MLOC_28676.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_28676.1" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_28676.1Predicted protein (129 aa)    
Predicted Functional Partners:
ndhH
Uncharacterized protein (171 aa)
       
 
  0.950
MLOC_430.1
Uncharacterized protein (168 aa)
       
 
  0.936
MLOC_76215.1
Uncharacterized protein (190 aa)
       
 
  0.936
ndhJ
Uncharacterized protein (162 aa)
       
 
  0.936
MLOC_37109.1
Predicted protein (121 aa)
       
 
  0.806
MLOC_61703.2
Predicted protein (189 aa)
   
   
  0.750
MLOC_74488.1
Predicted protein (192 aa)
   
          0.519
MLOC_15227.2
Uncharacterized protein (392 aa)
   
        0.517
MLOC_67396.4
Predicted protein (278 aa)
   
          0.513
MLOC_8265.2
Predicted protein (259 aa)
   
 
  0.504
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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