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MLOC_29311.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_29311.1" - tRNA in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_29311.1tRNA (adenine(58)-N(1))-methyltransferase (244 aa)    
Predicted Functional Partners:
MLOC_68945.3
Uncharacterized protein (514 aa)
     
  0.997
MLOC_44694.2
Uncharacterized protein (326 aa)
     
  0.997
MLOC_66066.1
Uncharacterized protein (285 aa)
   
  0.964
MLOC_516.3
Uncharacterized protein (187 aa)
   
  0.964
MLOC_10745.2
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family (278 aa)
   
  0.964
MLOC_37060.1
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1024 aa)
   
   
  0.960
MLOC_72719.1
Uncharacterized protein (241 aa)
     
   
  0.957
MLOC_78246.1
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family (152 aa)
   
 
  0.955
MLOC_61929.1
Uncharacterized protein (475 aa)
     
  0.953
MLOC_57691.2
Uncharacterized protein (526 aa)
     
  0.953
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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