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STRINGSTRING
MLOC_3091.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_3091.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_3091.1Uncharacterized protein (2587 aa)    
Predicted Functional Partners:
MLOC_43304.1
Uncharacterized protein (556 aa)
     
 
  0.975
MLOC_10482.5
Uncharacterized protein (1822 aa)
     
 
  0.970
MLOC_60118.1
Uncharacterized protein (906 aa)
     
   
  0.957
MLOC_56116.1
Uncharacterized protein (453 aa)
     
 
  0.956
MLOC_48709.1
Uncharacterized protein (876 aa)
     
   
  0.955
MLOC_12582.1
Uncharacterized protein (679 aa)
     
 
  0.955
MLOC_64326.1
Uncharacterized protein; Belongs to the DEAD box helicase family (609 aa)
     
 
  0.942
MLOC_69075.2
Uncharacterized protein (777 aa)
     
 
  0.937
MLOC_37060.1
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1024 aa)
     
 
  0.934
MLOC_74624.1
Uncharacterized protein (642 aa)
     
   
  0.911
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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