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MLOC_3103.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_3103.1" - E3 ubiquitin-protein ligase in Hordeum vulgare
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_3103.1E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (300 aa)    
Predicted Functional Partners:
MLOC_41668.1
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (124 aa)
       
    0.618
MLOC_9931.1
Uncharacterized protein (1756 aa)
         
  0.616
MLOC_74893.1
Uncharacterized protein (1472 aa)
         
  0.616
MLOC_69831.1
Uncharacterized protein (1469 aa)
         
  0.616
MLOC_69164.1
Uncharacterized protein (1183 aa)
         
  0.616
MLOC_65501.3
Uncharacterized protein (805 aa)
         
  0.612
MLOC_47469.1
Uncharacterized protein (1467 aa)
         
  0.574
MLOC_6055.1
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family (148 aa)
       
    0.562
MLOC_70428.1
Uncharacterized protein (419 aa)
       
  0.549
MLOC_70097.1
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family (148 aa)
       
  0.549
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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