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STRINGSTRING
MLOC_3255.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_3255.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_3255.1Uncharacterized protein; CTP synthase (482 aa)    
Predicted Functional Partners:
MLOC_34318.1
Uncharacterized protein (510 aa)
   
 
  0.970
MLOC_10567.1
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (496 aa)
   
  0.958
MLOC_77080.1
Uncharacterized protein (192 aa)
     
 
    0.950
MLOC_15664.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (670 aa)
     
  0.950
MLOC_54361.1
Uncharacterized protein (355 aa)
     
  0.948
MLOC_61052.6
Uncharacterized protein; Belongs to the RNA polymerase beta chain family (823 aa)
     
  0.938
MLOC_54988.1
Uncharacterized protein (322 aa)
     
  0.907
MLOC_20045.2
Nucleoside diphosphate kinase (220 aa)
       
  0.891
MLOC_23699.1
Uncharacterized protein (153 aa)
     
 
    0.870
MLOC_66040.1
Uncharacterized protein; DNA-directed RNA polymerase (868 aa)
     
  0.869
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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