STRINGSTRING
rps12 protein (Hordeum vulgare) - STRING interaction network
"rps12" - Ribosomal protein S12 in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps12Ribosomal protein S12 (51 aa)    
Predicted Functional Partners:
MLOC_66305.3
Predicted protein ; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (350 aa)
   
  0.999
rps14
30S ribosomal protein S14, chloroplastic ; Binds 16S rRNA, required for the assembly of 30S particles (35 aa)
   
  0.999
MLOC_36623.1
Predicted protein (543 aa)
   
  0.998
MLOC_75821.1
Uncharacterized protein (148 aa)
 
  0.998
MLOC_68939.1
Predicted protein (264 aa)
   
  0.998
MLOC_60101.1
Uncharacterized protein (440 aa)
   
  0.998
MLOC_81866.1
Predicted protein (128 aa)
   
  0.998
MLOC_59892.3
Uncharacterized protein (147 aa)
 
  0.997
MLOC_66323.1
Predicted protein (189 aa)
   
  0.997
MLOC_9478.1
Uncharacterized protein (97 aa)
   
  0.997
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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