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MLOC_35934.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_35934.1" - PRA1 family protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_35934.1PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (220 aa)    
Predicted Functional Partners:
MLOC_52073.1
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (287 aa)
     
        0.591
MLOC_61636.2
Predicted protein (204 aa)
       
 
  0.579
MLOC_44900.1
Uncharacterized protein (53 aa)
       
      0.517
MLOC_13452.1
Protein YIPF (207 aa)
     
 
  0.498
MLOC_59123.1
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (108 aa)
           
  0.493
MLOC_14648.1
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (244 aa)
           
  0.493
MLOC_26110.1
Uncharacterized protein (203 aa)
     
 
  0.475
MLOC_12436.1
Uncharacterized protein (541 aa)
           
  0.433
MLOC_72417.2
Uncharacterized protein (500 aa)
       
      0.429
MLOC_59238.2
Uncharacterized protein; Belongs to the glutamine synthetase family (842 aa)
       
      0.429
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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