STRINGSTRING
MLOC_36472.3 protein (Hordeum vulgare) - STRING interaction network
"MLOC_36472.3" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_36472.3Predicted protein ; Lignin degradation and detoxification of lignin-derived products (634 aa)    
Predicted Functional Partners:
MLOC_4319.1
Predicted protein (197 aa)
       
  0.714
MLOC_80218.3
Uncharacterized protein (205 aa)
   
 
  0.610
MLOC_78645.1
Predicted protein (154 aa)
   
 
  0.610
MLOC_5890.1
Predicted protein (501 aa)
   
 
  0.610
MLOC_58244.3
Uncharacterized protein (761 aa)
   
 
  0.610
MLOC_57716.1
Predicted protein (980 aa)
   
 
  0.610
MLOC_52795.2
Uncharacterized protein (946 aa)
   
 
  0.610
MLOC_4755.1
Predicted protein (1001 aa)
   
 
  0.610
MLOC_39833.1
Predicted protein (507 aa)
   
 
  0.610
MLOC_30801.1
Predicted protein (1002 aa)
   
 
  0.610
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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