STRINGSTRING
MLOC_38383.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_38383.1" - Predicted protein in Hordeum vulgare
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_38383.1Predicted protein (254 aa)    
Predicted Functional Partners:
MLOC_15664.1
Uncharacterized protein (670 aa)
     
  0.997
MLOC_10840.1
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (125 aa)
     
  0.995
MLOC_66040.1
RNA polymerase I largest subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (868 aa)
     
  0.995
MLOC_4294.1
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (829 aa)
     
  0.995
MLOC_54361.1
Uncharacterized protein (355 aa)
     
  0.993
MLOC_4940.1
Uncharacterized protein (42 aa)
     
  0.987
MLOC_67112.1
Predicted protein (142 aa)
     
  0.980
MLOC_15609.1
Uncharacterized protein (118 aa)
     
  0.978
MLOC_68236.1
Predicted protein (321 aa)
     
        0.963
MLOC_6378.1
60S ribosome subunit biogenesis protein NIP7 homolog ; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (188 aa)
     
        0.963
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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