STRINGSTRING
MLOC_38535.2 protein (Hordeum vulgare) - STRING interaction network
"MLOC_38535.2" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_38535.2Predicted protein (648 aa)    
Predicted Functional Partners:
MLOC_77846.2
Predicted protein (167 aa)
       
  0.941
MLOC_65799.2
Predicted protein (489 aa)
       
  0.940
MLOC_57538.2
Uncharacterized protein (933 aa)
     
  0.929
MLOC_38489.2
Uncharacterized protein (920 aa)
     
  0.929
MLOC_51300.1
Predicted protein ; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (438 aa)
     
  0.897
MLOC_71860.1
Predicted protein (302 aa)
     
 
    0.870
MLOC_44354.7
Predicted protein (1965 aa)
       
    0.830
MLOC_81592.1
Uncharacterized protein (759 aa)
     
  0.809
MLOC_13833.1
Predicted protein (667 aa)
     
  0.809
MLOC_5906.1
Uncharacterized protein (542 aa)
     
  0.792
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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