STRINGSTRING
MLOC_3857.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_3857.1" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_3857.1Predicted protein (111 aa)    
Predicted Functional Partners:
MLOC_21708.1
Predicted protein (167 aa)
     
  0.999
MLOC_58581.1
Uncharacterized protein (357 aa)
   
  0.999
MLOC_14764.2
ATP synthase gamma chain (190 aa)
   
  0.999
atpE
F-ATPase epsilon subunit ; Produces ATP from ADP in the presence of a proton gradient across the membrane (69 aa)
   
  0.999
MLOC_13690.1
Uncharacterized protein (271 aa)
   
  0.999
MLOC_75792.2
ATP synthase subunit beta ; Produces ATP from ADP in the presence of a proton gradient across the membrane (418 aa)
   
  0.999
MLOC_70791.2
ATP synthase subunit beta ; Produces ATP from ADP in the presence of a proton gradient across the membrane (418 aa)
   
  0.999
atpB
F-ATPase subunit beta ; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (129 aa)
   
  0.999
MLOC_75555.1
Predicted protein (69 aa)
     
  0.974
MLOC_59475.1
Predicted protein ; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (165 aa)
   
  0.973
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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