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STRINGSTRING
MLOC_38894.2 protein (Hordeum vulgare) - STRING interaction network
"MLOC_38894.2" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_38894.2Uncharacterized protein (210 aa)    
Predicted Functional Partners:
MLOC_66196.1
Malate synthase ; Belongs to the malate synthase family (563 aa)
   
 
  0.979
MLOC_51128.1
Uncharacterized protein (455 aa)
     
 
  0.903
MLOC_36687.2
Uncharacterized protein (225 aa)
     
 
  0.830
MLOC_66594.1
Citrate synthase ; Belongs to the citrate synthase family (472 aa)
   
 
  0.801
MLOC_10622.1
Citrate synthase (507 aa)
   
 
  0.801
MLOC_69030.3
Uncharacterized protein (437 aa)
   
 
  0.798
MLOC_75045.2
Malate dehydrogenase (309 aa)
   
 
  0.711
MLOC_45165.2
Predicted protein (293 aa)
   
 
  0.711
MLOC_37114.1
Uncharacterized protein (574 aa)
     
 
  0.701
MLOC_15935.1
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate- level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit (159 aa)
         
  0.671
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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