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STRINGSTRING
MLOC_38898.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_38898.1" - Polyadenylate-binding protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_38898.1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (551 aa)    
Predicted Functional Partners:
MLOC_70274.1
Uncharacterized protein (247 aa)
     
  0.987
MLOC_7192.1
Uncharacterized protein (463 aa)
     
  0.963
MLOC_17939.1
Nuclear cap-binding protein subunit 2 (71 aa)
     
  0.958
MLOC_74063.2
Uncharacterized protein (692 aa)
     
  0.956
MLOC_77976.1
Predicted protein; Belongs to the eukaryotic initiation factor 4E family (195 aa)
     
  0.955
MLOC_27537.7
Uncharacterized protein (508 aa)
     
 
  0.947
MLOC_5958.2
Predicted protein (270 aa)
     
 
  0.947
MLOC_64220.1
Uncharacterized protein (119 aa)
     
  0.945
eIF4E
eIF4E; Belongs to the eukaryotic initiation factor 4E family (161 aa)
     
  0.938
MLOC_52014.2
Uncharacterized protein (1030 aa)
     
  0.936
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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