STRINGSTRING
psaB protein (Hordeum vulgare) - STRING interaction network
"psaB" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psaBUncharacterized protein (41 aa)    
Predicted Functional Partners:
MLOC_67992.1
Uncharacterized protein (52 aa)
 
  0.992
MLOC_20568.1
Uncharacterized protein (38 aa)
 
  0.989
MLOC_66074.2
Predicted protein (235 aa)
   
 
  0.988
MLOC_73050.2
Predicted protein (147 aa)
   
 
  0.983
MLOC_81416.1
Predicted protein (97 aa)
   
 
  0.981
MLOC_53258.1
Predicted protein (209 aa)
   
 
  0.980
MLOC_20487.1
Uncharacterized protein (247 aa)
       
  0.924
MLOC_44755.2
Predicted protein (245 aa)
       
 
  0.844
psbC
Protein CP-43 ; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water-plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation (150 aa)
   
   
  0.795
psbB
Uncharacterized protein (206 aa)
   
   
  0.795
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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