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STRINGSTRING
MLOC_40295.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_40295.1" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_40295.1Predicted protein (332 aa)    
Predicted Functional Partners:
MLOC_65945.1
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (763 aa)
           
  0.641
MLOC_7806.1
Uncharacterized protein (208 aa)
     
        0.639
MLOC_58033.3
Uncharacterized protein (369 aa)
     
        0.639
MLOC_68887.1
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family (254 aa)
     
        0.520
MLOC_32958.1
Uncharacterized protein (120 aa)
           
  0.475
MLOC_67467.3
O-acyltransferase (450 aa)
         
  0.420
MLOC_15432.3
O-acyltransferase (320 aa)
         
  0.420
MLOC_69499.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (572 aa)
     
 
    0.414
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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