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STRINGSTRING
MLOC_40627.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_40627.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_40627.1Uncharacterized protein (291 aa)    
Predicted Functional Partners:
MLOC_43394.1
Uncharacterized protein (232 aa)
     
        0.844
MLOC_16803.1
Uncharacterized protein (200 aa)
     
        0.774
MLOC_63683.1
Predicted protein (74 aa)
     
        0.652
MLOC_22512.2
Uncharacterized protein (287 aa)
     
        0.651
MLOC_14208.1
Uncharacterized protein; Belongs to the FBPase class 1 family (265 aa)
     
        0.637
MLOC_15227.2
Uncharacterized protein (392 aa)
     
        0.632
MLOC_80913.1
Predicted protein (188 aa)
   
        0.610
MLOC_14582.2
Uncharacterized protein (401 aa)
   
 
  0.588
MLOC_40062.1
30S ribosomal protein 3, chloroplastic (82 aa)
     
        0.576
MLOC_81101.1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX (203 aa)
   
 
  0.562
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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