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STRINGSTRING
MLOC_43545.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_43545.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_43545.1Uncharacterized protein (1183 aa)    
Predicted Functional Partners:
MLOC_20286.1
Uncharacterized protein (299 aa)
       
 
  0.701
MLOC_64606.3
Uncharacterized protein (280 aa)
           
  0.695
MLOC_19075.1
Uncharacterized protein (142 aa)
           
  0.695
MLOC_73144.4
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (1129 aa)
           
  0.694
MLOC_76757.2
Predicted protein (342 aa)
           
  0.693
MLOC_74051.5
Uncharacterized protein (327 aa)
           
  0.693
MLOC_71332.2
Transcription factor; Transcriptional activator of alpha-amylase expression (440 aa)
           
  0.693
MLOC_36554.1
Uncharacterized protein (253 aa)
           
  0.693
MLOC_5869.2
Uncharacterized protein (231 aa)
           
  0.505
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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