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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
MLOC_43627.4 protein (Hordeum vulgare) - STRING interaction network
"MLOC_43627.4" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_43627.4Predicted protein; Uncharacterized protein (494 aa)    
Predicted Functional Partners:
MLOC_11621.1
Uncharacterized protein (458 aa)
     
 
  0.858
MLOC_65799.2
Uncharacterized protein (489 aa)
       
  0.851
MLOC_74711.1
Uncharacterized protein (725 aa)
     
  0.806
MLOC_51300.1
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (438 aa)
         
  0.751
MLOC_64281.1
Uncharacterized protein (331 aa)
     
  0.733
MLOC_58994.2
Uncharacterized protein (276 aa)
     
  0.733
MLOC_58690.2
Uncharacterized protein (228 aa)
     
   
  0.708
MLOC_65975.1
Uncharacterized protein (994 aa)
     
0.701
MLOC_72063.1
Uncharacterized protein (1012 aa)
     
0.674
MLOC_60828.1
Predicted protein (87 aa)
         
  0.668
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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