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STRINGSTRING
MLOC_43780.5 protein (Hordeum vulgare) - STRING interaction network
"MLOC_43780.5" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_43780.5Uncharacterized protein (321 aa)    
Predicted Functional Partners:
MLOC_81623.1
Uncharacterized protein (112 aa)
     
 
  0.999
MLOC_77209.2
Uncharacterized protein (343 aa)
     
 
  0.962
4525152
Photosystem II CP43 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water-plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbC subfamily (473 aa)
       
 
  0.921
MLOC_64318.1
Uncharacterized protein (276 aa)
     
   
  0.877
MLOC_39327.2
Uncharacterized protein (303 aa)
     
 
  0.873
MLOC_64060.1
Uncharacterized protein (196 aa)
     
        0.869
MLOC_68150.3
Uncharacterized protein (187 aa)
     
   
  0.857
MLOC_15154.1
Uncharacterized protein (621 aa)
     
        0.855
MLOC_56053.1
Probable alanine--tRNA ligase, chloroplastic; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family (981 aa)
     
        0.842
MLOC_51058.1
Uncharacterized protein (227 aa)
     
 
  0.831
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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