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STRINGSTRING
MLOC_43989.2 protein (Hordeum vulgare) - STRING interaction network
"MLOC_43989.2" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_43989.2Uncharacterized protein; Belongs to the GRAS family (590 aa)    
Predicted Functional Partners:
MLOC_77763.7
Uncharacterized protein (265 aa)
       
 
  0.845
MLOC_77438.2
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (703 aa)
       
 
  0.842
MLOC_69988.1
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (485 aa)
       
 
  0.842
MLOC_64795.1
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (688 aa)
       
 
  0.842
MLOC_67174.1
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (390 aa)
       
 
  0.743
MLOC_52321.2
Uncharacterized protein (360 aa)
           
  0.729
MLOC_56910.1
Uncharacterized protein (79 aa)
           
  0.721
MLOC_61603.1
Uncharacterized protein (869 aa)
           
  0.707
MLOC_53744.1
Predicted protein (307 aa)
           
  0.662
MLOC_25708.2
Uncharacterized protein (254 aa)
           
  0.662
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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