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STRINGSTRING
MLOC_4418.3 protein (Hordeum vulgare) - STRING interaction network
"MLOC_4418.3" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_4418.3Predicted protein (297 aa)    
Predicted Functional Partners:
MLOC_71860.1
Uncharacterized protein (302 aa)
     
  0.780
MLOC_75462.1
Uncharacterized protein (162 aa)
     
  0.675
MLOC_58466.1
Uncharacterized protein (347 aa)
     
  0.675
MLOC_62365.1
Uncharacterized protein (86 aa)
     
    0.674
MLOC_55247.2
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (206 aa)
       
      0.658
MLOC_54310.3
Predicted protein (191 aa)
       
      0.658
MLOC_38244.2
Uncharacterized protein (485 aa)
       
      0.646
MLOC_13886.1
Uncharacterized protein (503 aa)
       
      0.646
MLOC_17602.1
Uncharacterized protein (270 aa)
     
 
  0.643
MLOC_68734.1
Uncharacterized protein (757 aa)
     
    0.635
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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