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MLOC_44370.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_44370.1" - Pseudouridine synthase in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_44370.1Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (394 aa)    
Predicted Functional Partners:
MLOC_5045.1
Predicted protein (592 aa)
     
   
  0.829
MLOC_67682.1
tRNA pseudouridine synthase (282 aa)
   
   
  0.809
MLOC_2136.2
Uncharacterized protein (239 aa)
   
   
  0.809
MLOC_13939.8
tRNA pseudouridine synthase (248 aa)
   
   
  0.809
MLOC_52425.9
MutL-like protein 3; Uncharacterized protein (1208 aa)
   
   
  0.788
MLOC_76611.1
Uncharacterized protein (572 aa)
   
   
  0.774
MLOC_43456.4
tRNA pseudouridine synthase (381 aa)
   
   
  0.774
MLOC_76403.3
Uncharacterized protein; Belongs to the IPP transferase family (467 aa)
   
   
  0.746
MLOC_6320.2
Uncharacterized protein (174 aa)
   
   
  0.745
MLOC_34460.4
tRNA pseudouridine synthase (417 aa)
   
   
  0.713
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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