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STRINGSTRING
MLOC_4528.3 protein (Hordeum vulgare) - STRING interaction network
"MLOC_4528.3" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_4528.3Uncharacterized protein (268 aa)    
Predicted Functional Partners:
MLOC_60869.1
Uncharacterized protein (379 aa)
 
       
  0.926
MLOC_63297.1
Uncharacterized protein (133 aa)
       
 
  0.839
MLOC_71880.1
Uncharacterized protein (522 aa)
     
   
  0.828
MLOC_80730.1
Membrane-anchored ubiquitin-fold protein; May serve as docking site to facilitate the association of other proteins to the plasma membrane (118 aa)
           
  0.828
MLOC_72172.1
Uncharacterized protein (255 aa)
           
  0.823
MLOC_51564.1
Uncharacterized protein (598 aa)
       
 
  0.753
CTU1
Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position (359 aa)
           
  0.741
MLOC_51384.1
Uncharacterized protein (213 aa)
           
  0.735
MLOC_59570.1
Predicted protein (609 aa)
           
  0.734
MLOC_54206.2
Uncharacterized protein (367 aa)
           
  0.734
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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