STRINGSTRING
MLOC_46260.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_46260.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_46260.1Uncharacterized protein (87 aa)    
Predicted Functional Partners:
MLOC_10075.1
Uncharacterized protein (568 aa)
   
   
  0.660
MLOC_53811.2
Uridine kinase (489 aa)
     
 
  0.640
MLOC_37996.6
Uridine kinase (419 aa)
     
 
  0.640
MLOC_37443.1
Predicted protein (353 aa)
     
 
  0.640
MLOC_59029.2
Predicted protein (417 aa)
         
  0.598
MLOC_82094.1
GrpE protein homolog ; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (238 aa)
   
  0.538
MLOC_72354.2
GrpE protein homolog ; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (252 aa)
   
  0.538
MLOC_53374.2
GrpE protein homolog ; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (327 aa)
   
  0.538
MLOC_38181.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (881 aa)
   
   
  0.524
MLOC_68522.2
Predicted protein (801 aa)
         
  0.518
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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