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STRINGSTRING
GATC protein (Hordeum vulgare) - STRING interaction network
"GATC" - Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial in Hordeum vulgare
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATCGlutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln); Belongs to the GatC family (145 aa)    
Predicted Functional Partners:
GATA
Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln) (437 aa)
     
 
  0.992
MLOC_55368.3
Uncharacterized protein (817 aa)
     
  0.987
MLOC_54742.1
Uncharacterized protein (122 aa)
     
  0.987
MLOC_8121.1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family (795 aa)
     
 
    0.979
MLOC_38768.2
Uncharacterized protein (521 aa)
     
 
    0.979
MLOC_11161.3
Predicted protein (240 aa)
     
 
    0.975
MLOC_3970.1
Uncharacterized protein (1308 aa)
     
  0.969
MLOC_58977.1
Predicted protein; Belongs to the WD repeat SEC13 family (323 aa)
     
  0.967
MLOC_39888.4
Uncharacterized protein (177 aa)
     
  0.967
MLOC_74269.1
Predicted protein; Belongs to the WD repeat SEC13 family (305 aa)
     
  0.965
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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