STRINGSTRING
MLOC_477.3 protein (Hordeum vulgare) - STRING interaction network
"MLOC_477.3" - Phenylalanine ammonia-lyase in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_477.3Phenylalanine ammonia-lyase (707 aa)    
Predicted Functional Partners:
MLOC_68100.1
Predicted protein (501 aa)
     
 
  0.928
MLOC_4708.3
Predicted protein (505 aa)
     
 
  0.928
MLOC_55027.2
Predicted protein (553 aa)
   
 
  0.925
MLOC_70104.1
Predicted protein (473 aa)
   
 
  0.910
MLOC_58764.5
Predicted protein (569 aa)
   
 
  0.903
MLOC_6813.1
Predicted protein (556 aa)
       
  0.903
MLOC_2815.1
Predicted protein (500 aa)
       
  0.903
MLOC_18901.1
Predicted protein (448 aa)
       
  0.903
MLOC_69871.1
Predicted protein (534 aa)
     
 
  0.896
MLOC_80438.1
Aspartate aminotransferase (336 aa)
         
  0.874
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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